README for perm. Release v1.0 June 2014 Sharlee Climer 'perm' is a program for permuting genotype data for validation trials. ----------------------------------------------------------------------------- The usage can be found by typing 'perm' on the command line. It follows: Fatal: Usage: perm input.txt output.txt numDataCols numDataRows numHeadCols numHeadRows where - 'input.txt' is your genotype data - 'output.txt' will hold the permuted data - 'numDataCols' is the number of individuals - 'numDataRows' is the number of SNPs - 'numHeadCols' is the number of header columns - 'numHeadRows' is the number of header rows ----------------------------------------------------------------------------- ** Important: This program assumes each row represents a marker and each genotype is a single string with no white space. ** Contact sharleeclimer@gmail.com with questions, bug reports, etc.